GATOR complex protein WDR59

AltitudeomicsDB
Protein Official symbol WDR59
Aliases WDR59 KIAA1923 FP977
Chromosomal Location 16
Length 974
Uniprot ID Q6PJI9
EC number None
Protein family Information(Pfam) PF00400;
PDB id None
InterPro ID IPR006575;IPR016135;IPR015943;IPR001680;IPR019775;IPR017986;IPR036322;IPR039456;
dbSNP rs11557260

Protein Protein Interaction

0%
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AltitudeomicsDB
Protein 1 Protein 2 Combine Score
NPRL3 NPRL2 0.995
MIOS WDR24 0.993
DEPDC5 NPRL2 0.993
MIOS WDR59 0.992
DEPDC5 WDR59 0.991
SEH1L MIOS 0.991
NPRL3 DEPDC5 0.991
SEH1L WDR24 0.991
WDR24 NPRL2 0.991
SEH1L WDR59 0.99
DEPDC5 WDR24 0.99
DEPDC5 MIOS 0.989
MIOS NPRL2 0.989
WDR59 NPRL2 0.989
NPRL3 WDR24 0.989
NPRL3 WDR59 0.988
SEC13 WDR24 0.988
DEPDC5 SEH1L 0.988
SEC13 WDR59 0.987
SEH1L NPRL2 0.986
SEC13 MIOS 0.986
NPRL3 MIOS 0.985
SEC13 NPRL2 0.985
NPRL3 SEH1L 0.983
DEPDC5 SEC13 0.982
NPRL3 SEC13 0.981
WDR24 WDR59 0.948
WDR24 SESN2 0.932
SEH1L SEC13 0.93
WDR59 SESN2 0.927
MIOS SESN2 0.911
Gene Ontology Semantic Similarity
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# 8131 (NPRL3) 54468 (MIOS) 9681 (DEPDC5) 81929 (SEH1L) 84219 (WDR24) 79726 (WDR59) 6396 (SEC13) 10641 (NPRL2)
8131 (NPRL3) 1.00 1.00 0.80 0.67 1.00 1.00 0.67 0.83
54468 (MIOS) 1.00 1.00 0.59 1.00 1.00 1.00 1.00 1.00
9681 (DEPDC5) 0.80 0.59 1.00 0.44 0.59 0.59 0.44 0.66
81929 (SEH1L) 0.67 1.00 0.44 1.00 1.00 1.00 1.00 0.59
84219 (WDR24) 1.00 1.00 0.59 1.00 1.00 1.00 1.00 1.00
79726 (WDR59) 1.00 1.00 0.59 1.00 1.00 1.00 1.00 1.00
6396 (SEC13) 0.67 1.00 0.44 1.00 1.00 1.00 1.00 0.59
10641 (NPRL2) 0.83 1.00 0.66 0.59 1.00 1.00 0.59 1.00
Association with High Altitude
Protein Official symbol Source Organism Tissue of Expression Level of hypoxia Altitude Duration of experiment Level of expression Fold change Experiment details geographical location ethnicity of the patients Control group Control (Fold change) Reference (PMID)
WDR59 Toad Heart - 3464 m 33 day upregulated 2.020816319 RNA-seq Tibetan Plateau Asiatic toad 1 Zoige (High altitute Toad) Vs Chengdu (Low altitude toad) - 28673260
Association with TF
TF TF Entrez Gene Gene Entrez Type PMID Database
Association with miRNA
miRTarBase ID miRNA Species (miRNA) Protein Official Symbol Human Entrez ID Species (Target Gene) Experiments Support Type References (PMID)
MIRT017154 hsa-miR-335-5p Homo sapiens WDR59 79726 Homo sapiens Microarray Functional MTI (Weak) 18185580
MIRT050742 hsa-miR-17-3p Homo sapiens WDR59 79726 Homo sapiens CLASH Functional MTI (Weak) 23622248
MIRT611983 hsa-miR-6809-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT611985 hsa-miR-4768-5p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT611982 hsa-miR-1305 Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT611984 hsa-miR-6833-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT611986 hsa-miR-607 Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT611988 hsa-miR-3671 Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT611981 hsa-miR-335-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT611987 hsa-miR-4753-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT611989 hsa-miR-130b-5p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT615997 hsa-miR-6873-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT615998 hsa-miR-6817-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT615999 hsa-miR-7110-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT696149 hsa-miR-138-2-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
MIRT696153 hsa-miR-590-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
MIRT696150 hsa-miR-4735-5p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
MIRT696144 hsa-miR-4482-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
MIRT696147 hsa-miR-6789-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
MIRT696148 hsa-miR-4707-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
MIRT696145 hsa-miR-7159-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
MIRT696152 hsa-miR-6872-3p Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
MIRT696146 hsa-miR-4775 Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
MIRT696151 hsa-miR-4258 Homo sapiens WDR59 79726 Homo sapiens HITS-CLIP Functional MTI (Weak) 23313552
Gene Ontology
ID GO ID GO Term GO Type
79726 GO:0005515 protein binding GOTERM_MF_DIRECT
79726 GO:0034198 cellular response to amino acid starvation GOTERM_BP_DIRECT
79726 GO:0032008 positive regulation of TOR signaling GOTERM_BP_DIRECT
79726 GO:0061700 GATOR2 complex GOTERM_CC_DIRECT
Pathways
Human Entrez ID KEGG ID KEGG Term
Association with Disease
Protein Official Symbol Human Entrez ID Disease Name Disease Id Disease Semantic Type Semantic score DSI DPI Disease Type
Association with Drug
Protein Official Symbol Human Entrez ID drug_claim_primary_name drug_name drug_chembl_id interaction_types