Beta-parvin (Affixin)

AltitudeomicsDB
Protein Official symbol PARVB
Aliases PARVB CGI-56
Chromosomal Location  22
Length 364
Uniprot ID Q9HBI1
EC number None
Protein family Information(Pfam) PF00307;
PDB id 4EDL;4EDM;4EDN;
InterPro ID IPR001715;IPR036872;IPR028433;
dbSNP rs34476853 rs1983609

Protein Protein Interaction

0%
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AltitudeomicsDB
Protein 1 Protein 2 Combine Score
ILK LIMS2 0.999
PARVA PXN 0.999
LIMS1 ILK 0.999
ILK PARVA 0.999
PARVB ILK 0.999
LIMS1 RSU1 0.998
LIMS1 PARVB 0.997
PARVB PXN 0.997
LIMS1 PARVA 0.996
ILK PXN 0.995
PARVB ARHGEF6 0.99
PARVB PARVA 0.985
CDC5L PARVA 0.98
LIMS1 CDC5L 0.98
ILK RSU1 0.98
PARVB CDC5L 0.98
PARVB LIMS2 0.974
ILK ARHGEF6 0.972
PARVB RSU1 0.968
PARVA LIMS2 0.968
ACTN1 PXN 0.958
PXN ARHGEF6 0.946
ILK ACTN1 0.943
LIMS1 PXN 0.939
RSU1 PARVA 0.934
LIMS1 ACTN1 0.93
PARVB ACTN1 0.921
LIMS1 LIMS2 0.901
Gene Ontology Semantic Similarity
Download Tab separated file
# 3611 (ILK) 55742 (PARVA) 3987 (LIMS1) 29780 (PARVB) 988 (CDC5L) 87 (ACTN1) 5829 (PXN) 6251 (RSU1)
3611 (ILK) 1.00 0.69 0.74 0.68 0.47 0.53 0.69 1.00
55742 (PARVA) 0.69 1.00 0.72 0.94 0.54 0.61 0.78 1.00
3987 (LIMS1) 0.74 0.72 1.00 0.72 0.49 0.54 0.72 1.00
29780 (PARVB) 0.68 0.94 0.72 1.00 0.52 0.60 0.79 1.00
988 (CDC5L) 0.47 0.54 0.49 0.52 1.00 0.57 0.57 1.00
87 (ACTN1) 0.53 0.61 0.54 0.60 0.57 1.00 0.65 1.00
5829 (PXN) 0.69 0.78 0.72 0.79 0.57 0.65 1.00 1.00
6251 (RSU1) 1.00 1.00 1.00 1.00 1.00 1.00 1.00 1.00
Association with High Altitude
Protein Official symbol Source Organism Tissue of Expression Level of hypoxia Altitude Duration of experiment Level of expression Fold change Experiment details geographical location ethnicity of the patients Control group Control (Fold change) Reference (PMID)
PARVB Toad Liver - 3464 m 33 day downregulated -3.205752944 RNA-seq Tibetan Plateau Asiatic toad 1 Zoige (High altitute Toad) Vs Chengdu (Low altitude toad) - 28673260
Association with TF
TF TF Entrez Gene Gene Entrez Type PMID Database
SPI1 6688 PARVB 29780 proximal_filtered 22955619 TRANSFAC
Association with miRNA
miRTarBase ID miRNA Species (miRNA) Protein Official Symbol Human Entrez ID Species (Target Gene) Experiments Support Type References (PMID)
MIRT032339 hsa-let-7b-5p Homo sapiens PARVB 29780 Homo sapiens Proteomics Functional MTI (Weak) 18668040
MIRT496404 hsa-miR-5787 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496405 hsa-miR-4505 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496406 hsa-miR-6860 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496413 hsa-miR-371b-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496412 hsa-miR-373-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496409 hsa-miR-3187-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496415 hsa-miR-4478 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496417 hsa-miR-3929 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496411 hsa-miR-616-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496414 hsa-miR-3613-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496416 hsa-miR-4419b Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496407 hsa-miR-612 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496408 hsa-miR-5189-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT496410 hsa-miR-1285-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22291592
MIRT535464 hsa-miR-5698 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535465 hsa-miR-1178-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535466 hsa-miR-6794-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535467 hsa-miR-143-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535469 hsa-miR-3652 Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535464 hsa-miR-5698 Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535468 hsa-miR-4430 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535472 hsa-miR-504-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535473 hsa-miR-3135b Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535465 hsa-miR-1178-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535469 hsa-miR-3652 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535471 hsa-miR-122-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535473 hsa-miR-3135b Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535466 hsa-miR-6794-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535476 hsa-miR-367-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535473 hsa-miR-3135b Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT535468 hsa-miR-4430 Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535472 hsa-miR-504-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535470 hsa-miR-3622b-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535467 hsa-miR-143-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535475 hsa-miR-6499-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535474 hsa-miR-3934-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535474 hsa-miR-3934-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535475 hsa-miR-6499-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535470 hsa-miR-3622b-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535476 hsa-miR-367-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535471 hsa-miR-122-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535485 hsa-miR-3664-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535477 hsa-miR-1267 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535477 hsa-miR-1267 Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535480 hsa-miR-484 Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535485 hsa-miR-3664-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535486 hsa-miR-4797-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535481 hsa-miR-3155b Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535481 hsa-miR-3155b Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535482 hsa-miR-3155a Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535483 hsa-miR-4639-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535482 hsa-miR-3155a Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535484 hsa-miR-5007-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535478 hsa-miR-1304-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535483 hsa-miR-4639-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535487 hsa-miR-2355-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535488 hsa-miR-6729-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535479 hsa-miR-5693 Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 21572407
MIRT535480 hsa-miR-484 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT535479 hsa-miR-5693 Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 22012620
MIRT627865 hsa-miR-1287-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT627866 hsa-miR-3121-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT627868 hsa-miR-548c-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 27292025
MIRT627868 hsa-miR-548c-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT627867 hsa-miR-501-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 23824327
MIRT725254 hsa-miR-6733-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725252 hsa-miR-6739-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725258 hsa-miR-4646-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725256 hsa-miR-5589-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725253 hsa-miR-3153 Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725263 hsa-miR-370-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725255 hsa-miR-4668-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725257 hsa-miR-4731-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725260 hsa-miR-3692-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725261 hsa-miR-6884-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725264 hsa-miR-6893-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725262 hsa-miR-1306-5p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT725259 hsa-miR-204-3p Homo sapiens PARVB 29780 Homo sapiens HITS-CLIP Functional MTI (Weak) 19536157
MIRT765727 hsa-miR-340-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 27292025
MIRT771007 hsa-miR-4684-5p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 27292025
MIRT778638 hsa-miR-6771-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 27292025
MIRT779925 hsa-miR-6827-3p Homo sapiens PARVB 29780 Homo sapiens PAR-CLIP Functional MTI (Weak) 27292025
Gene Ontology
ID GO ID GO Term GO Type
29780 GO:0030018 Z disc GOTERM_CC_DIRECT
29780 GO:0005925 focal adhesion GOTERM_CC_DIRECT
29780 GO:0007155 cell adhesion GOTERM_BP_DIRECT
29780 GO:0031532 actin cytoskeleton reorganization GOTERM_BP_DIRECT
29780 GO:0071963 establishment or maintenance of cell polarity regulating cell shape GOTERM_BP_DIRECT
29780 GO:0005829 cytosol GOTERM_CC_DIRECT
29780 GO:0030032 lamellipodium assembly GOTERM_BP_DIRECT
29780 GO:0030027 lamellipodium GOTERM_CC_DIRECT
29780 GO:0003779 actin binding GOTERM_MF_DIRECT
29780 GO:0005886 plasma membrane GOTERM_CC_DIRECT
29780 GO:0005515 protein binding GOTERM_MF_DIRECT
29780 GO:0030031 cell projection assembly GOTERM_BP_DIRECT
29780 GO:0005856 cytoskeleton GOTERM_CC_DIRECT
Pathways
Human Entrez ID KEGG ID KEGG Term
29780 hsa04510 Focal adhesion
Association with Disease
Protein Official Symbol Human Entrez ID Disease Name Disease Id Disease Semantic Type Semantic score DSI DPI Disease Type
Association with Drug
Protein Official Symbol Human Entrez ID drug_claim_primary_name drug_name drug_chembl_id interaction_types