β-synuclein

AltitudeomicsDB
Protein Official symbol SNCB
Aliases SNCB
Chromosomal Location 5
Length 134
Uniprot ID Q16143
EC number None
Protein family Information(Pfam) PF01387;
PDB id None
InterPro ID IPR001058;IPR002461;
dbSNP None

Protein Protein Interaction

0%
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AltitudeomicsDB
Protein 1 Protein 2 Combine Score
CPLX1 SNAP25 0.998
SNAP25 RAB3A 0.991
SLC17A7 SLC32A1 0.988
SYN1 SNAP25 0.986
SYN1 RAB3A 0.981
SNAP25 SLC32A1 0.973
SNAP25 SLC17A7 0.972
CPLX1 RAB3A 0.97
CPLX2 SNAP25 0.966
CCK NTSR2 0.963
CAMK2A MAPT 0.9620000000000001
CPLX1 SYN1 0.9620000000000001
RAB3A SLC17A7 0.9570000000000001
CPLX1 SLC17A7 0.9520000000000001
RAB3A SLC32A1 0.95
MAPT APP 0.9490000000000001
CPLX1 SLC32A1 0.9470000000000001
HRH3 HTR5A 0.9470000000000001
RAB3C RAB3A 0.9159999999999999
RAB14 RAB8B 0.915
CCK APP 0.914
RAB8B RAB3A 0.9129999999999999
RAB8B RAB3C 0.912
SYP SNAP25 0.91
RAB14 RAB3A 0.909
RAB14 SNAP25 0.909
HRH3 APP 0.907
RAB14 RAB3C 0.907
NTSR2 APP 0.9059999999999999
HTR5A APP 0.904
MTF1 SNCB 0.9
CPLX2 CPLX1 0.898
SYN1 SYP 0.88
SYP SLC17A7 0.856
SYN1 SLC17A7 0.83
SYN1 SLC32A1 0.813
FAM171B SLC1A2 0.7979999999999999
OPALIN HTR5A 0.792
ATP2B3 SLC8A2 0.7859999999999999
SYP RAB3A 0.7859999999999999
HPCA KCNC1 0.785
SYP SLC32A1 0.7829999999999999
SLC1A2 SLC17A7 0.775
RAB3C SNAP25 0.7709999999999999
APP SYP 0.7659999999999999
SYNPR SNAP25 0.758
MTF1 MT3 0.755
SNCB RAB3A 0.727
UNC5A SNCB 0.698
STMN2 SNAP25 0.687
SNCB TMEM263 0.687
OPALIN KCNJ9 0.684
TSACC SNCB 0.684
MAPT SYP 0.682
SLC1A2 SLC32A1 0.6779999999999999
KCNJ9 HTR5A 0.675
SNCB SNAP25 0.67
SNCB SNCAIP 0.664
SCRT1 KCNC1 0.662
SNCB SYP 0.6579999999999999
OPALIN KCNC1 0.657
SNCB CPLX1 0.657
KCNJ9 KCNC1 0.655
CCK SLC32A1 0.655
CPLX2 SYP 0.654
KCNC1 SLC32A1 0.654
MAPT SNCB 0.654
OPALIN NTSR2 0.65
RAB8B SNCB 0.647
CAMK2A CPLX2 0.647
CPLX2 SNCB 0.647
UCHL1 SYP 0.6459999999999999
CPLX2 SLC32A1 0.6459999999999999
MAPT SLC1A2 0.6459999999999999
APP UCHL1 0.645
CPLX2 RAB3A 0.644
SLC1A2 SNAP25 0.639
CAMK2A SYN1 0.635
SYNC SNCB 0.634
STMN2 ELAVL4 0.632
SYNC RAB8B 0.631
SNCB SLC32A1 0.63
STMN2 ACTL6B 0.63
SYNC RAB3A 0.626
PIAS2 SNCB 0.626
SNCB SLC17A7 0.626
PIAS2 RAB8B 0.622
SYN1 RAB3C 0.62
PIAS2 SYNC 0.62
SLC1A2 SYP 0.615
CAMK2A KCNC1 0.613
KCNJ9 SNCB 0.611
SYNPR SNCB 0.611
SNCB SLC1A2 0.61
CCK HTR5A 0.608
SYNPR SLC17A7 0.603
MAPT SNAP25 0.599
ELAVL4 SNAP25 0.599
HPCA ATP2B3 0.598
SCRT1 CDK5R2 0.597
GABRD CPLX1 0.596
SNCB MT3 0.596
CPLX2 KCNC1 0.593
SNCB NEUROD6 0.5920000000000001
OPALIN SLC32A1 0.591
MAPT SYN1 0.589
SNCB SYN1 0.588
GABRD SLC32A1 0.5870000000000001
NTSR2 HTR5A 0.586
CCK SNCB 0.585
ELAVL4 SNCB 0.584
SNCB ACTL6B 0.584
SNCAIP RAB3A 0.583
HPCA SNCB 0.583
SCRT1 SLC8A2 0.581
SYN1 APP 0.581
ELAVL4 MAPT 0.579
GABRD NTSR2 0.578
SYNPR HTR5A 0.578
SNCB UCHL1 0.5770000000000001
GABRD SNCB 0.5770000000000001
KCNJ4 KCNC1 0.575
SNCB RAB3C 0.575
KCTD16 SNCB 0.574
KCNC1 SNAP25 0.573
SCRT1 SLC32A1 0.5720000000000001
CCK SLC17A7 0.57
CA10 HTR5A 0.569
HRH3 SNCB 0.569
SNCB APP 0.5670000000000001
SNCB NTSR2 0.5670000000000001
STMN2 SNCB 0.5660000000000001
CPLX1 SYP 0.565
CDK5R2 SNAP25 0.565
GABRD KCNC1 0.562
STMN2 SYN1 0.562
ATP2B3 SNAP25 0.562
SYNPR CA10 0.562
FAM163B HTR5A 0.561
SYNPR NTSR2 0.561
SCRT1 KCNJ9 0.561
SYNC SNCAIP 0.56
CPLX2 SYN1 0.5589999999999999
CCK KCNJ9 0.557
SNCB CDK5R2 0.557
CA10 MT3 0.555
SNCB FAM171B 0.555
CPLX2 CDK5R2 0.555
KCNJ9 MT3 0.5529999999999999
MAPT UCHL1 0.5529999999999999
HPCA SYN1 0.5529999999999999
SYNPR RAB3C 0.5529999999999999
CAMK2A CDK5R2 0.5529999999999999
SNCB HTR5A 0.552
OPALIN FAM163B 0.551
SYNPR KCNJ9 0.551
KCNJ9 HRH3 0.551
RAB14 SNCB 0.55
KCNJ9 SLC32A1 0.55
CAMK2A SNCB 0.5489999999999999
OPALIN MT3 0.5479999999999999
CAMK2A HTR5A 0.547
SYNPR OPALIN 0.547
CA10 KCNJ9 0.547
HTR5A SLC8A2 0.544
NEUROD6 HTR5A 0.544
SYN1 ACTL6B 0.5429999999999999
KCNJ9 NTSR2 0.5429999999999999
CA10 ATP2B3 0.5429999999999999
KCNJ9 FAM163B 0.542
SYNPR SLC32A1 0.542
FAM163B SNCB 0.542
GABRD HTR5A 0.541
CA10 VSTM2B 0.541
KCNJ9 ATP2B3 0.541
HTR5A ATP2B3 0.541
SNCB KCNJ4 0.54
GABRD OPALIN 0.54
STMN2 SYP 0.539
HPCA SNAP25 0.539
SCRT1 SLC17A7 0.5379999999999999
SYN1 SLC1A2 0.5379999999999999
NTSR2 MT3 0.5379999999999999
SCRT1 NEUROD6 0.537
SEPT4 SNCB 0.537
OPALIN SNCB 0.536
HTR5A SLC17A7 0.536
SNCB KCNC1 0.536
HTR5A SLC32A1 0.536
GABRD KCNJ9 0.536
SCRT1 SNCB 0.535
STMN2 SLC1A2 0.535
STMN2 SYNPR 0.535
HTR5A MT3 0.535
HRH3 NTSR2 0.535
KCNJ9 VSTM2B 0.535
STMN2 SLC32A1 0.535
SCRT1 HTR5A 0.535
GABRD FAM163B 0.534
FAM163B SLC32A1 0.534
SCRT1 FAM163B 0.534
CCK OPALIN 0.534
SNCB ATP2B3 0.534
HPCA KCNJ9 0.534
OPALIN VSTM2B 0.5329999999999999
VSTM2B SNCB 0.5329999999999999
SYNPR FAM163B 0.5329999999999999
HPCA HTR5A 0.5329999999999999
SNCB SLC8A2 0.5329999999999999
SCRT1 ATP2B3 0.5329999999999999
FAM163B NTSR2 0.5329999999999999
FAM163B ATP2B3 0.5329999999999999
VSTM2B ATP2B3 0.5329999999999999
GABRD VSTM2B 0.532
SYNPR CCK 0.532
KCNC1 ATP2B3 0.532
CA10 SNCB 0.532
SCRT1 HPCA 0.532
SCRT1 VSTM2B 0.532
VSTM2B HTR5A 0.532
FAM163B VSTM2B 0.532
SYNPR ATP2B3 0.531
OPALIN ATP2B3 0.531
SCRT1 OPALIN 0.531
HPCA FAM163B 0.531
SCRT1 HRH3 0.531
HPCA OPALIN 0.531
CCK FAM163B 0.531
KCTD8 SNCB 0.531
STMN2 CA10 0.531
GABRD HPCA 0.531
SCRT1 CPLX2 0.53
GABRD ATP2B3 0.53
FAM163B HRH3 0.53
SCRT1 CA10 0.53
SYNPR MT3 0.53
VSTM2B NTSR2 0.53
FAM163B KCNJ4 0.53
SCRT1 NTSR2 0.53
APP SNAP25 0.529
KCNJ9 CPLX2 0.529
ATP2B3 SLC32A1 0.528
SYNPR GABRD 0.528
CAMK2A SLC17A7 0.528
SYNPR SYN1 0.527
CAMK2A SNAP25 0.526
CA10 OPALIN 0.526
GABRD SLC17A7 0.525
CA10 FAM163B 0.522
SEPT4 OPALIN 0.522
GABRD HRH3 0.521
HTR5A KCNC1 0.521
OPALIN SNAP25 0.52
RAB3C SNCAIP 0.52
KCNJ9 SLC8A2 0.517
CAMK2A SYP 0.517
KCNJ9 SNAP25 0.517
SCRT1 SNAP25 0.516
RAB3C SYP 0.515
SYNPR SLC1A2 0.515
NEUROD6 SLC17A7 0.515
UCHL1 SNCAIP 0.514
SYN1 SLC8A2 0.514
CA10 SNAP25 0.512
STMN2 NEUROD6 0.512
NEUROD6 ATP2B3 0.511
SYNPR HPCA 0.511
KCNJ9 SYN1 0.51
CAMK2A HPCA 0.51
NEUROD6 SLC32A1 0.51
CAMK2A OPALIN 0.509
HRH3 VSTM2B 0.509
CCK SNAP25 0.509
SCRT1 CCK 0.509
CAMK2A SLC32A1 0.509
CA10 SLC32A1 0.509
CA10 NEUROD6 0.508
GABRD MT3 0.507
VSTM2B SLC32A1 0.506
ELAVL4 NEUROD6 0.506
KCNJ9 NEUROD6 0.505
VSTM2B MT3 0.505
GABRD KCNJ4 0.505
SCRT1 SYNPR 0.505
CDK5R2 HTR5A 0.504
SYNPR VSTM2B 0.504
CPLX2 SLC17A7 0.501
CDK5R2 SLC32A1 0.5
FAM163B MT3 0.499
ATP2B3 MT3 0.499
GABRD CPLX2 0.498
FAM163B SLC8A2 0.498
HPCA SLC8A2 0.4970000000000001
CA10 KCNC1 0.496
CPLX2 ACTL6B 0.496
SCRT1 MT3 0.494
CA10 GABRD 0.494
HPCA MT3 0.493
ELAVL4 SLC32A1 0.493
KCNJ4 ATP2B3 0.492
HPCA NTSR2 0.492
CCK GABRD 0.492
HRH3 SLC8A2 0.491
HTR5A SNAP25 0.491
GABRD NEUROD6 0.491
CAMK2A KCNJ9 0.49
PIAS2 RAB3A 0.489
RAB3C SLC32A1 0.489
KCNJ9 ACTL6B 0.489
CAMK2A NTSR2 0.488
NTSR2 ATP2B3 0.488
ELAVL4 SYP 0.487
CPLX1 RAB3C 0.487
CA10 CCK 0.486
CA10 HPCA 0.485
CCK SYP 0.484
SCRT1 SYN1 0.484
CPLX2 HTR5A 0.483
SYNPR CAMK2A 0.483
SYN1 HTR5A 0.483
FAM171B SNCAIP 0.483
CPLX2 ELAVL4 0.483
SYN1 KCNC1 0.482
VSTM2B KCNC1 0.482
CAMK2A ACTL6B 0.48
HPCA ACTL6B 0.479
SEPT4 SNCAIP 0.478
CCK HPCA 0.478
SNAP25 MT3 0.477
APP SLC1A2 0.477
CPLX2 FAM163B 0.476
CA10 NTSR2 0.475
HPCA SLC32A1 0.475
HRH3 SLC32A1 0.475
STMN2 CPLX2 0.475
KCNC1 SLC8A2 0.474
NEUROD6 SNAP25 0.474
CCK SYN1 0.472
CDK5R2 KCNC1 0.472
CA10 SLC8A2 0.472
STMN2 MAPT 0.47
HRH3 ATP2B3 0.469
FAM163B KCNC1 0.469
CCK KCNC1 0.468
GABRD SLC8A2 0.467
SCRT1 CPLX1 0.467
CAMK2A SLC8A2 0.467
NTSR2 SLC32A1 0.465
GABRD SNAP25 0.465
CAMK2A ATP2B3 0.464
KCNJ4 HTR5A 0.464
CAMK2A RAB3A 0.463
RAB3C SLC17A7 0.463
CCK MT3 0.462
KCNJ9 KCNJ4 0.461
CPLX2 SLC8A2 0.461
HPCA VSTM2B 0.46
FAM163B SYN1 0.46
CPLX1 CDK5R2 0.46
SLC32A1 MT3 0.459
MAPT SLC17A7 0.458
KCNJ9 SLC17A7 0.457
SYN1 ATP2B3 0.456
KCNJ9 CDK5R2 0.455
HPCA CDK5R2 0.454
SNAP25 ACTL6B 0.453
CA10 ACTL6B 0.453
GABRD ACTL6B 0.453
KCNC1 SLC17A7 0.452
VSTM2B KCNJ4 0.452
GABRD UNC5A 0.452
CDK5R2 SYN1 0.451
SCRT1 ACTL6B 0.45
FAM163B CDK5R2 0.449
ATP2B3 ACTL6B 0.448
CDK5R2 SLC8A2 0.448
SYNPR NEUROD6 0.448
OPALIN SLC8A2 0.447
RAB8B SNCAIP 0.447
SYNPR KCNC1 0.446
SYNPR RAB3A 0.446
SCRT1 GABRD 0.445
SYNPR ACTL6B 0.444
SYNPR SLC8A2 0.444
UNC5A CDK5R2 0.4429999999999999
ELAVL4 KCNC1 0.4429999999999999
OPALIN NEUROD6 0.442
KCTD16 KCNJ9 0.441
VSTM2B SNAP25 0.441
KCNC1 ACTL6B 0.441
ELAVL4 ACTL6B 0.441
CDK5R2 SYP 0.44
OPALIN SLC17A7 0.44
CA10 CPLX2 0.44
SYNPR CPLX2 0.439
HPCA SYP 0.4379999999999999
KCNJ4 SLC32A1 0.4379999999999999
SCRT1 KCNJ4 0.436
NTSR2 SNAP25 0.436
CDK5R2 ATP2B3 0.435
SYNPR HRH3 0.435
CPLX2 ATP2B3 0.434
KCNC1 MT3 0.434
SNAP25 SLC8A2 0.433
RAB3A MT3 0.433
HPCA KCNJ4 0.4320000000000001
GABRD SYN1 0.4320000000000001
CA10 CDK5R2 0.43
CCK ATP2B3 0.43
OPALIN SYN1 0.429
SLC8A2 SLC32A1 0.429
NTSR2 SLC8A2 0.428
STMN2 HPCA 0.427
VSTM2B ACTL6B 0.427
HRH3 ACTL6B 0.427
HRH3 KCNC1 0.425
FAM163B SNAP25 0.425
HTR5A ACTL6B 0.425
CAMK2A GABRD 0.425
CCK VSTM2B 0.424
FAM163B ACTL6B 0.424
ELAVL4 SYN1 0.422
CDK5R2 RAB3A 0.422
CPLX2 VSTM2B 0.422
CPLX1 KCNC1 0.422
SYNPR CDK5R2 0.421
HRH3 UNC5A 0.42
SCRT1 STMN2 0.42
SLC1A2 MT3 0.419
VSTM2B SLC8A2 0.419
MAPT NEUROD6 0.418
ELAVL4 APP 0.418
CA10 SYN1 0.417
MAPT SNCAIP 0.416
ATP2B3 SLC17A7 0.416
SYP ACTL6B 0.416
CAMK2A MT3 0.415
FAM163B NEUROD6 0.415
SLC8A2 ACTL6B 0.414
OPALIN HRH3 0.414
HPCA HRH3 0.413
HRH3 KCNJ4 0.412
CAMK2A CPLX1 0.412
OPALIN KCNJ4 0.411
SLC8A2 SLC17A7 0.411
OPALIN CPLX2 0.41
NEUROD6 RAB3A 0.409
SYN1 MT3 0.409
OPALIN SLC1A2 0.409
CAMK2A SLC1A2 0.408
SLC32A1 ACTL6B 0.408
CA10 HRH3 0.408
HTR5A SLC1A2 0.408
HTR5A SYP 0.408
ATP2B3 SYP 0.407
HPCA CPLX2 0.406
NTSR2 SYN1 0.406
NTSR2 KCNC1 0.405
SYNPR KCNJ4 0.404
FAM163B CPLX1 0.403
HPCA NEUROD6 0.403
KCNJ9 SLC1A2 0.403
STMN2 CAMK2A 0.403
CCK SLC8A2 0.403
KCNJ4 SLC8A2 0.401
HRH3 CDK5R2 0.401
NTSR2 SYP 0.401
CCK KCNJ4 0.4
Gene Ontology Semantic Similarity
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# 6616 (SNAP25) 57030 (SLC17A7) 6853 (SYN1) 885 (CCK) 815 (CAMK2A) 5864 (RAB3A) 4137 (MAPT) 115827 (RAB3C) 51552 (RAB14) 51762 (RAB8B) 6855 (SYP) 23620 (NTSR2) 3361 (HTR5A) 4520 (MTF1) 492 (ATP2B3) 3208 (HPCA) 6506 (SLC1A2) 351 (APP) 132204 (SYNPR) 6620 (SNCB) 11075 (STMN2) 128229 (TSACC) 3765 (KCNJ9) 83482 (SCRT1) 3746 (KCNC1) 7345 (UCHL1) 9063 (PIAS2) 1996 (ELAVL4) 2563 (GABRD) 9627 (SNCAIP) 3761 (KCNJ4) 56934 (CA10) 140679 (SLC32A1) 6543 (SLC8A2) 4504 (MT3) 51412 (ACTL6B)
6616 (SNAP25) 1.00 0.09 0.67 0.58 0.58 0.71 0.67 0.71 0.59 0.67 0.62 0.14 0.22 0.51 0.64 0.54 0.56 0.71 1.00 0.29 0.87 0.84 0.62 0.26 0.06 0.55 0.60 0.31 0.73 0.81 0.63 0.48 0.09 0.06 0.53 0.22
57030 (SLC17A7) 0.09 1.00 0.19 0.06 0.08 0.08 0.08 0.08 0.07 0.08 0.07 0.06 0.06 0.08 0.28 0.06 0.66 0.08 0.12 0.05 0.09 0.09 0.23 0.12 0.29 0.07 0.08 0.05 0.09 0.09 0.21 0.21 0.59 0.50 0.09 0.09
6853 (SYN1) 0.67 0.19 1.00 0.45 0.50 0.55 0.63 0.55 0.68 0.68 0.48 0.18 0.24 0.43 0.53 0.42 0.47 0.63 1.00 0.27 0.66 0.65 0.49 0.34 0.11 0.47 0.50 0.29 0.54 0.64 0.51 0.64 0.17 0.18 0.46 0.23
885 (CCK) 0.58 0.06 0.45 1.00 0.41 0.49 0.47 0.49 0.39 0.55 0.45 0.10 0.16 0.32 0.43 0.39 0.36 0.56 0.69 0.20 0.60 0.63 0.41 0.18 0.04 0.37 0.42 0.22 0.52 0.59 0.42 0.32 0.06 0.04 0.34 0.16
815 (CAMK2A) 0.58 0.08 0.50 0.41 1.00 0.50 0.62 0.50 0.45 0.51 0.41 0.14 0.18 0.41 0.47 0.36 0.42 0.59 1.00 0.24 0.57 0.56 0.44 0.26 0.05 0.46 0.55 0.23 0.49 0.57 0.46 0.48 0.08 0.06 0.46 0.19
5864 (RAB3A) 0.71 0.08 0.55 0.49 0.50 1.00 0.63 1.00 0.79 0.80 0.50 0.14 0.19 0.41 0.56 0.48 0.43 0.64 1.00 0.25 0.71 0.71 0.47 0.26 0.05 0.50 0.51 0.27 0.57 0.69 0.51 0.48 0.08 0.06 0.45 0.20
4137 (MAPT) 0.67 0.08 0.63 0.47 0.62 0.63 1.00 0.63 0.59 0.63 0.52 0.21 0.24 0.63 0.60 0.53 0.57 0.76 1.00 0.25 0.70 0.67 0.59 0.26 0.05 0.57 0.59 0.34 0.63 0.70 0.60 0.48 0.08 0.06 0.56 0.18
115827 (RAB3C) 0.71 0.08 0.55 0.49 0.50 1.00 0.63 1.00 0.79 0.80 0.50 0.14 0.19 0.41 0.56 0.48 0.43 0.64 1.00 0.25 0.71 0.71 0.47 0.26 0.05 0.50 0.51 0.27 0.57 0.69 0.51 0.48 0.08 0.06 0.45 0.20
51552 (RAB14) 0.59 0.07 0.68 0.39 0.45 0.79 0.59 0.79 1.00 0.92 0.41 0.14 0.22 0.38 0.47 0.40 0.37 0.57 1.00 0.24 0.57 0.55 0.40 0.26 0.04 0.45 0.45 0.27 0.45 0.56 0.43 0.48 0.07 0.06 0.40 0.16
51762 (RAB8B) 0.67 0.08 0.68 0.55 0.51 0.80 0.63 0.80 0.92 1.00 0.48 0.14 0.22 0.42 0.54 0.43 0.42 0.65 1.00 0.26 0.66 0.66 0.46 0.26 0.05 0.50 0.51 0.28 0.54 0.65 0.49 0.48 0.08 0.06 0.44 0.19
6855 (SYP) 0.62 0.07 0.48 0.45 0.41 0.50 0.52 0.50 0.41 0.48 1.00 0.12 0.20 0.34 0.43 0.40 0.35 0.54 0.82 0.23 0.63 0.64 0.40 0.21 0.05 0.38 0.42 0.28 0.50 0.61 0.43 0.38 0.07 0.05 0.36 0.17
23620 (NTSR2) 0.14 0.06 0.18 0.10 0.14 0.14 0.21 0.14 0.14 0.14 0.12 1.00 0.77 0.14 0.14 0.10 0.14 0.14 0.14 0.09 0.14 0.14 0.19 0.14 0.04 0.14 0.14 0.09 0.72 0.14 0.19 0.24 0.06 0.04 0.18 0.14
3361 (HTR5A) 0.22 0.06 0.24 0.16 0.18 0.19 0.24 0.19 0.22 0.22 0.20 0.77 1.00 0.25 0.17 0.25 0.15 0.25 0.29 0.26 0.22 0.22 0.20 0.18 0.04 0.16 0.18 0.32 0.45 0.22 0.20 0.30 0.06 0.05 0.25 0.14
4520 (MTF1) 0.51 0.08 0.43 0.32 0.41 0.41 0.63 0.41 0.38 0.42 0.34 0.14 0.25 1.00 0.38 0.30 0.33 0.64 1.00 0.21 0.49 0.47 0.35 1.00 0.05 0.38 0.52 0.43 0.39 0.48 0.38 0.48 0.07 0.06 0.38 0.36
492 (ATP2B3) 0.64 0.28 0.53 0.43 0.47 0.56 0.60 0.56 0.47 0.54 0.43 0.14 0.17 0.38 1.00 0.38 0.54 0.59 1.00 0.23 0.62 0.61 0.58 0.26 0.28 0.44 0.47 0.24 0.50 0.61 0.67 0.48 0.26 0.62 0.42 0.17
3208 (HPCA) 0.54 0.06 0.42 0.39 0.36 0.48 0.53 0.48 0.40 0.43 0.40 0.10 0.25 0.30 0.38 1.00 0.32 0.47 0.69 0.61 0.60 0.57 0.36 0.18 0.04 0.33 0.37 0.22 0.46 0.54 0.38 0.32 0.06 0.04 0.47 0.16
6506 (SLC1A2) 0.56 0.66 0.47 0.36 0.42 0.43 0.57 0.43 0.37 0.42 0.35 0.14 0.15 0.33 0.54 0.32 1.00 0.53 1.00 0.21 0.54 0.51 0.46 0.26 0.23 0.38 0.41 0.21 0.40 0.52 0.49 0.48 0.68 0.44 0.37 0.16
351 (APP) 0.71 0.08 0.63 0.56 0.59 0.64 0.76 0.64 0.57 0.65 0.54 0.14 0.25 0.64 0.59 0.47 0.53 1.00 1.00 0.31 0.71 0.72 0.57 0.26 0.05 0.55 0.58 0.43 0.64 0.75 0.59 0.48 0.08 0.06 0.60 0.20
132204 (SYNPR) 1.00 0.12 1.00 0.69 1.00 1.00 1.00 1.00 1.00 1.00 0.82 0.14 0.29 1.00 1.00 0.69 1.00 1.00 1.00 0.36 1.00 1.00 1.00 0.26 0.07 1.00 1.00 0.37 1.00 1.00 1.00 0.48 0.11 0.06 1.00 0.26
6620 (SNCB) 0.29 0.05 0.27 0.20 0.24 0.25 0.25 0.25 0.24 0.26 0.23 0.09 0.26 0.21 0.23 0.61 0.21 0.31 0.36 1.00 0.29 0.30 0.23 0.16 0.03 0.20 0.22 0.18 0.27 0.29 0.23 0.28 0.06 0.04 0.58 0.14
11075 (STMN2) 0.87 0.09 0.66 0.60 0.57 0.71 0.70 0.71 0.57 0.66 0.63 0.14 0.22 0.49 0.62 0.60 0.54 0.71 1.00 0.29 1.00 0.86 0.60 0.26 0.06 0.53 0.59 0.31 0.73 0.82 0.62 0.48 0.09 0.06 0.51 0.22
128229 (TSACC) 0.84 0.09 0.65 0.63 0.56 0.71 0.67 0.71 0.55 0.66 0.64 0.14 0.22 0.47 0.61 0.57 0.51 0.72 1.00 0.30 0.86 1.00 0.59 0.26 0.06 0.52 0.58 0.33 0.74 0.85 0.60 0.48 0.09 0.06 0.49 0.23
3765 (KCNJ9) 0.62 0.23 0.49 0.41 0.44 0.47 0.59 0.47 0.40 0.46 0.40 0.19 0.20 0.35 0.58 0.36 0.46 0.57 1.00 0.23 0.60 0.59 1.00 0.26 0.68 0.41 0.44 0.24 0.50 0.59 0.96 0.48 0.24 0.31 0.39 0.16
83482 (SCRT1) 0.26 0.12 0.34 0.18 0.26 0.26 0.26 0.26 0.26 0.26 0.21 0.14 0.18 1.00 0.26 0.18 0.26 0.26 0.26 0.16 0.26 0.26 0.26 1.00 0.07 0.26 0.26 0.16 0.26 0.26 0.26 0.48 0.11 0.06 0.34 0.26
3746 (KCNC1) 0.06 0.29 0.11 0.04 0.05 0.05 0.05 0.05 0.04 0.05 0.05 0.04 0.04 0.05 0.28 0.04 0.23 0.05 0.07 0.03 0.06 0.06 0.68 0.07 1.00 0.04 0.05 0.04 0.06 0.06 0.57 0.11 0.30 0.36 0.05 0.06
7345 (UCHL1) 0.55 0.07 0.47 0.37 0.46 0.50 0.57 0.50 0.45 0.50 0.38 0.14 0.16 0.38 0.44 0.33 0.38 0.55 1.00 0.20 0.53 0.52 0.41 0.26 0.04 1.00 0.46 0.21 0.45 0.60 0.43 0.48 0.07 0.06 0.41 0.17
9063 (PIAS2) 0.60 0.08 0.50 0.42 0.55 0.51 0.59 0.51 0.45 0.51 0.42 0.14 0.18 0.52 0.47 0.37 0.41 0.58 1.00 0.22 0.59 0.58 0.44 0.26 0.05 0.46 1.00 0.24 0.49 0.58 0.46 0.48 0.08 0.06 0.43 0.40
1996 (ELAVL4) 0.31 0.05 0.29 0.22 0.23 0.27 0.34 0.27 0.27 0.28 0.28 0.09 0.32 0.43 0.24 0.22 0.21 0.43 0.37 0.18 0.31 0.33 0.24 0.16 0.04 0.21 0.24 1.00 0.28 0.31 0.24 0.28 0.06 0.04 0.24 0.14
2563 (GABRD) 0.73 0.09 0.54 0.52 0.49 0.57 0.63 0.57 0.45 0.54 0.50 0.72 0.45 0.39 0.50 0.46 0.40 0.64 1.00 0.27 0.73 0.74 0.50 0.26 0.06 0.45 0.49 0.28 1.00 0.71 0.53 0.48 0.08 0.06 0.43 0.21
9627 (SNCAIP) 0.81 0.09 0.64 0.59 0.57 0.69 0.70 0.69 0.56 0.65 0.61 0.14 0.22 0.48 0.61 0.54 0.52 0.75 1.00 0.29 0.82 0.85 0.59 0.26 0.06 0.60 0.58 0.31 0.71 1.00 0.60 0.48 0.09 0.06 0.50 0.22
3761 (KCNJ4) 0.63 0.21 0.51 0.42 0.46 0.51 0.60 0.51 0.43 0.49 0.43 0.19 0.20 0.38 0.67 0.38 0.49 0.59 1.00 0.23 0.62 0.60 0.96 0.26 0.57 0.43 0.46 0.24 0.53 0.60 1.00 0.48 0.21 0.31 0.41 0.17
56934 (CA10) 0.48 0.21 0.64 0.32 0.48 0.48 0.48 0.48 0.48 0.48 0.38 0.24 0.30 0.48 0.48 0.32 0.48 0.48 0.48 0.28 0.48 0.48 0.48 0.48 0.11 0.48 0.48 0.28 0.48 0.48 0.48 1.00 0.18 0.10 0.64 0.48
140679 (SLC32A1) 0.09 0.59 0.17 0.06 0.08 0.08 0.08 0.08 0.07 0.08 0.07 0.06 0.06 0.07 0.26 0.06 0.68 0.08 0.11 0.06 0.09 0.09 0.24 0.11 0.30 0.07 0.08 0.06 0.08 0.09 0.21 0.18 1.00 0.49 0.08 0.09
6543 (SLC8A2) 0.06 0.50 0.18 0.04 0.06 0.06 0.06 0.06 0.06 0.06 0.05 0.04 0.05 0.06 0.62 0.04 0.44 0.06 0.06 0.04 0.06 0.06 0.31 0.06 0.36 0.06 0.06 0.04 0.06 0.06 0.31 0.10 0.49 1.00 0.08 0.06
4504 (MT3) 0.53 0.09 0.46 0.34 0.46 0.45 0.56 0.45 0.40 0.44 0.36 0.18 0.25 0.38 0.42 0.47 0.37 0.60 1.00 0.58 0.51 0.49 0.39 0.34 0.05 0.41 0.43 0.24 0.43 0.50 0.41 0.64 0.08 0.08 1.00 0.21
51412 (ACTL6B) 0.22 0.09 0.23 0.16 0.19 0.20 0.18 0.20 0.16 0.19 0.17 0.14 0.14 0.36 0.17 0.16 0.16 0.20 0.26 0.14 0.22 0.23 0.16 0.26 0.06 0.17 0.40 0.14 0.21 0.22 0.17 0.48 0.09 0.06 0.21 1.00
Association with High Altitude
Protein Official symbol Source Organism Tissue of Expression Level of hypoxia Altitude Duration of experiment Level of expression Fold change Experiment details geographical location ethnicity of the patients Control group Control (Fold change) Reference (PMID)
SNCB Rat Left brain cortices 300hPa 9144 m 1 hour upregulated 1.54±0.2 TMT labeled LTQ orbitrap Southwestern europe Male wistar rats 1 Adult male Wistar rats weighing 350 g 28697276
Association with TF
TF TF Entrez Gene Gene Entrez Type PMID Database
MTF1 4520 SNCB 6620 Unknown 14521756 TRUSST
Association with miRNA
miRTarBase ID miRNA Species (miRNA) Protein Official Symbol Human Entrez ID Species (Target Gene) Experiments Support Type References (PMID)
MIRT018267 hsa-miR-335-5p Homo sapiens SNCB 6620 Homo sapiens Microarray Functional MTI (Weak) 18185580
MIRT544931 hsa-miR-4773 Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544932 hsa-miR-376c-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544935 hsa-miR-548j-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544937 hsa-miR-548am-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544934 hsa-miR-548x-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544933 hsa-miR-4789-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544939 hsa-miR-548ah-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544944 hsa-miR-548bb-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544942 hsa-miR-548h-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544945 hsa-miR-548ac Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544938 hsa-miR-548aj-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544943 hsa-miR-548d-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544936 hsa-miR-548aq-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544941 hsa-miR-548z Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
MIRT544940 hsa-miR-548ae-3p Homo sapiens SNCB 6620 Homo sapiens PAR-CLIP Functional MTI (Weak) 21572407
Gene Ontology
ID GO ID GO Term GO Type
6620 GO:0050808 synapse organization GOTERM_BP_DIRECT
6620 GO:0005509 calcium ion binding GOTERM_MF_DIRECT
6620 GO:0004859 enzyme inhibitor activity GOTERM_MF_DIRECT
6620 GO:0005794 Golgi apparatus GOTERM_CC_DIRECT
6620 GO:0043086 negative regulation of catalytic activity GOTERM_BP_DIRECT
6620 GO:0043524 negative regulation of neuron apoptotic process GOTERM_BP_DIRECT
6620 GO:0005739 mitochondrion GOTERM_CC_DIRECT
6620 GO:0042417 dopamine metabolic process GOTERM_BP_DIRECT
6620 GO:0005737 cytoplasm GOTERM_CC_DIRECT
6620 GO:0045202 synapse GOTERM_CC_DIRECT
6620 GO:0007268 chemical synaptic transmission GOTERM_BP_DIRECT
6620 GO:0016234 inclusion body GOTERM_CC_DIRECT
6620 GO:0005654 nucleoplasm GOTERM_CC_DIRECT
Pathways
Human Entrez ID KEGG ID KEGG Term
Association with Disease
Protein Official Symbol Human Entrez ID Disease Name Disease Id Disease Semantic Type Semantic score DSI DPI Disease Type
SNCB 6620 Lewy Body Disease C0752347 Disease or Syndrome 0.47 0.707 0.241 disease
SNCB 6620 Schizophrenia C0036341 Mental or Behavioral Dysfunction 0.31 0.707 0.241 disease
Association with Drug
Protein Official Symbol Human Entrez ID drug_claim_primary_name drug_name drug_chembl_id interaction_types